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IMSC: Orbitrap Mass Spectrometry: from Dream to Mainstream

Presentations | 2009 | Thermo Fisher ScientificInstrumentation
LC/HRMS, LC/MS, LC/MS/MS, LC/Orbitrap
Industries
Manufacturer
Thermo Fisher Scientific

Summary

Importance of the Topic



Orbitrap mass spectrometry represents a major advance in analytical chemistry, delivering high resolving power, mass accuracy and dynamic range in a robust and compact format. Its ability to detect ions through image currents without consumable detectors and to provide accurate masses for all ions in a single acquisition enables applications ranging from proteomics to small molecule profiling and quality control.

Objectives and Overview



This summary retraces the evolution of the Orbitrap analyzer from theoretical concept to mainstream instrument. It highlights the historical challenges of electrostatic ion trapping, the milestones in prototype development, and the integration of novel ion injection and detection strategies that culminated in commercial instruments such as the Exactive and LTQ Orbitrap Velos.

Methodology and Instruments



The core of the Orbitrap is a quadro-logarithmic electrostatic potential that confines ions on stable orbits. Key methodological innovations included:
  • Electrodynamic squeezing: dynamically lowering the central electrode potential during ion entry to trap ion packets without physical barriers.
  • Fast radial injection via the curved quadrupole C-trap: ions are accumulated, cooled, then ejected radially into the Orbitrap in synchronized packets.
  • Image current detection on split outer electrodes: axial ion oscillations induce image currents, which are Fourier-transformed to generate mass spectra with high linear dynamic range.

Commercial implementations combine a linear ion trap (LTQ) for MS/MS with the C-trap and Orbitrap analyzer. Advanced high-voltage amplifiers, ultra-precise electrodes, vacuum systems (<10^–3 mbar) and low-noise preamplifiers ensure performance reproducibility.

Instrumentation Used



  • Quadrupole linear trap (LTQ) for ion accumulation and MS/MS fragmentation options (CID, HCD).
  • Curved rf-only quadrupole C-trap for ion storage, cooling, and radial injection.
  • Orbitrap mass analyzer with high-precision central and outer electrodes.
  • High-voltage amplifiers and low-noise image current preamplifiers.
  • ESI and MALDI ion sources for flexible sample introduction.
  • Fourier transform data system for transient acquisition (up to 10 MS/s) and spectral processing.

Main Results and Discussion



Prototypes demonstrated resolving powers exceeding 150,000 at m/z 200 and mass accuracy below 2 ppm with transient lengths of 0.8–1.0 s. Integration into commercial platforms achieved:
  • Exactive series: bench-top FTMS with up to 10 spectra per second, all-ions fragmentation capability, and high sensitivity across broad mass ranges.
  • LTQ Orbitrap Velos: hybrid instrument delivering 5–10 MS/MS events per second in real samples, combining linear trap speed with Orbitrap resolution.

Challenges such as electrode manufacturing tolerances, voltage stability, and ion injection efficiency were overcome through iterative design, precision machining and novel electrodynamic control.

Benefits and Practical Applications



  • High-throughput proteomics with deep coverage and reliable quantitation.
  • Targeted and untargeted small molecule analysis in metabolomics and environmental screening.
  • Quality assurance in pharmaceutical and food industries via accurate mass profiling.
  • Quantitative assays across wide dynamic ranges from trace to abundant analytes.

Future Trends and Potential Applications



Continued improvements in scan speed, sensitivity and miniaturization are expected. Emerging directions include ambient ionization coupling, imaging mass spectrometry, integrated multiomics workflows and real-time monitoring in clinical and industrial settings. Further optimization of data acquisition and processing will enable higher throughput and deeper insight into complex samples.

Conclusion



The Orbitrap mass analyzer has evolved from a theoretical construct into one of the most versatile and powerful tools in modern mass spectrometry. By overcoming fundamental trapping and detection challenges, it now underpins a wide range of real-world analytical applications. Ongoing developments promise to extend its impact across new fields and modalities.

References



  1. Pechalina Y.E., et al. SU Pat. 1247973 (1986).
  2. Makarov A.A. Anal. Chem. 72 (2000) 1156–1162.
  3. Makarov A.A. US Pat. 5,886,346 (1999).
  4. Hardman M., Makarov A.A. Anal. Chem. 75 (2003) 1699–1705.
  5. Denisov E., et al. Thermo Fisher Scientific internal reports (2003–2009).
  6. Czemper F., Hengelbrock O., Strupat K., Huels W. Thermo Fisher Scientific development notes.

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