LCMS
More information
WebinarsAbout usContact usTerms of use
LabRulez s.r.o. All rights reserved. Content available under a CC BY-SA 4.0 Attribution-ShareAlike
Author
DataApex
DataApex
Since 1991 DataApex develops and manufactures chromatography data stations. DataApex is constantly striving to provide users with efficient and up-to-date tools for chromatography data processing.
Tags
Article
Product
Software
Video
LinkedIn Logo

How to calculate Signal to Noise ratio in Clarity Chromatography Software

Tu, 23.9.2025
| Original article from: DataApex
Step-by-step guide to calculating signal-to-noise ratio in Clarity CDS. Learn how to evaluate noise, configure result tables, and assess peak quality.
Video placeholder
  • Photo: DataApex: How to calculate Signal to Noise ratio in Clarity Chromatography Software
  • Video: DataApex: How to calculate Signal to Noise ratio in Clarity Chromatography Software 

Introduction

Signal-to-noise ratio (S/N) is a critical parameter in chromatography for evaluating peak quality and method sensitivity. The Clarity Chromatography Data System (CDS) includes tools that allow users to calculate S/N directly from chromatograms. This guide explains the complete procedure step by step.

Tools and Requirements

  • Clarity CDS software with chromatogram visualization enabled
  • Chromatogram file containing peaks of interest
  • Result Table window for displaying calculated parameters

Step 1: Determining Noise

  1. Navigate to the Chromatogram → Noise and Drift menu.
  2. Select Noise Evaluation.
  3. In your chromatogram, mark an interval that contains only baseline noise (no peaks).
  4. The software determines the noise value and displays it above the Result Table.

Step 2: Configuring the Result Table

  1. Right-click inside the Result Table to open the local menu.
  2. Select Setup Columns to access the configuration dialog.
  3. Define a new column:
    • Name: Enter a descriptive label (e.g., S/N).
    • Expression: Input the formula Height / Noise, where Height refers to the peak height and Noise is the variable determined in Step 1.
  4. Disable the Calculate Total option, as it is not necessary for S/N.
  5. Confirm with OK to save settings.

Step 3: Viewing Signal-to-Noise Ratio

Once configured, the Result Table automatically calculates and displays the signal-to-noise ratio for every detected peak in the chromatogram. This allows rapid assessment of peak detectability and compliance with method validation requirements.

Discussion

The ability to evaluate S/N directly in Clarity provides several advantages:

  • Automation: Removes the need for manual calculations.
  • Accuracy: Uses consistent baseline noise determination across the chromatogram.
  • Validation Support: Helps confirm method sensitivity in accordance with regulatory guidelines (e.g., ICH Q2, USP).

Conclusion

Clarity CDS offers a straightforward workflow to calculate signal-to-noise ratio for chromatographic peaks. By first defining the noise baseline and then configuring a custom result column, users can quickly assess analytical sensitivity and peak quality.

For further learning and tutorials, additional videos are available on the official Clarity YouTube channel.

DataApex
LinkedIn Logo
 

Related content

Overcoming Strong Solvent Effects in the Analysis of Vepdegestrant

Applications
| 2026 | Agilent Technologies
Instrumentation
HPLC
Manufacturer
Agilent Technologies
Industries
Pharma & Biopharma

Identification of Double Bond Positions and Relative Acyl Chain Positions in Egg Yolk Phosphatidylcholines Using OAD-TOF System

Applications
| 2026 | Shimadzu
Instrumentation
LC/MS, LC/MS/MS, LC/TOF, LC/HRMS
Manufacturer
Shimadzu
Industries
Food & Agriculture

High Molecular-Weight Polysaccharide Characterization by SEC-MALS Using GTxResolve™ 1000 and 2000 Å SEC Columns

Applications
| 2026 | Waters
Instrumentation
GPC/SEC, Consumables, LC columns
Manufacturer
Waters
Industries
Pharma & Biopharma, Food & Agriculture

Development and Optimization for a Comprehensive LC/MS/MS Method for the Detection of 74 PFAS Compounds

Applications
| 2026 | Agilent Technologies
Instrumentation
LC/MS, LC/MS/MS, LC/QQQ
Manufacturer
Agilent Technologies
Industries
Food & Agriculture

PFAS in Biota: Risk Context & Robust Analytical Solutions

Others
| 2026 | ALS Europe
Instrumentation
Laboratory analysis, LC/MS, LC/MS/MS
Manufacturer
Industries
Environmental
 

Related articles

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science
Article | Scientists

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science

Two outstanding early-career researchers at UCT Prague, Filipa Oliveira and Stella Gonsales, received prestigious GAČR JUNIOR STAR grants for innovative research in materials science and sustainable chemistry.
UCT Prague
tag
share
more
Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription
Article | Science and research

Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription

Scientists at IOCB Prague reveal a previously unknown mechanism that initiates gene transcription. Using cryo-EM, they uncover how alarmone molecules enable RNA synthesis under stress.
Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
tag
share
more
Food Adulteration and How It Is Revealed by Analytical Chemistry
Article | Food

Food Adulteration and How It Is Revealed by Analytical Chemistry

Food adulteration threatens quality and consumer trust. Discover how HPLC and modern chromatographic systems from Watrex Praha help identify oil, honey, and wine adulteration with high confidence.
Watrex Praha
tag
share
more
Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria
Interview | Video

Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria

This podcast explores how chromatography (FPLC/SEC) and mass spectrometry support malaria drug discovery, from protein purification and QC to interaction studies and complex sample preparation.
Organomation
tag
share
more
 

Related content

Overcoming Strong Solvent Effects in the Analysis of Vepdegestrant

Applications
| 2026 | Agilent Technologies
Instrumentation
HPLC
Manufacturer
Agilent Technologies
Industries
Pharma & Biopharma

Identification of Double Bond Positions and Relative Acyl Chain Positions in Egg Yolk Phosphatidylcholines Using OAD-TOF System

Applications
| 2026 | Shimadzu
Instrumentation
LC/MS, LC/MS/MS, LC/TOF, LC/HRMS
Manufacturer
Shimadzu
Industries
Food & Agriculture

High Molecular-Weight Polysaccharide Characterization by SEC-MALS Using GTxResolve™ 1000 and 2000 Å SEC Columns

Applications
| 2026 | Waters
Instrumentation
GPC/SEC, Consumables, LC columns
Manufacturer
Waters
Industries
Pharma & Biopharma, Food & Agriculture

Development and Optimization for a Comprehensive LC/MS/MS Method for the Detection of 74 PFAS Compounds

Applications
| 2026 | Agilent Technologies
Instrumentation
LC/MS, LC/MS/MS, LC/QQQ
Manufacturer
Agilent Technologies
Industries
Food & Agriculture

PFAS in Biota: Risk Context & Robust Analytical Solutions

Others
| 2026 | ALS Europe
Instrumentation
Laboratory analysis, LC/MS, LC/MS/MS
Manufacturer
Industries
Environmental
 

Related articles

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science
Article | Scientists

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science

Two outstanding early-career researchers at UCT Prague, Filipa Oliveira and Stella Gonsales, received prestigious GAČR JUNIOR STAR grants for innovative research in materials science and sustainable chemistry.
UCT Prague
tag
share
more
Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription
Article | Science and research

Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription

Scientists at IOCB Prague reveal a previously unknown mechanism that initiates gene transcription. Using cryo-EM, they uncover how alarmone molecules enable RNA synthesis under stress.
Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
tag
share
more
Food Adulteration and How It Is Revealed by Analytical Chemistry
Article | Food

Food Adulteration and How It Is Revealed by Analytical Chemistry

Food adulteration threatens quality and consumer trust. Discover how HPLC and modern chromatographic systems from Watrex Praha help identify oil, honey, and wine adulteration with high confidence.
Watrex Praha
tag
share
more
Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria
Interview | Video

Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria

This podcast explores how chromatography (FPLC/SEC) and mass spectrometry support malaria drug discovery, from protein purification and QC to interaction studies and complex sample preparation.
Organomation
tag
share
more
 

Related content

Overcoming Strong Solvent Effects in the Analysis of Vepdegestrant

Applications
| 2026 | Agilent Technologies
Instrumentation
HPLC
Manufacturer
Agilent Technologies
Industries
Pharma & Biopharma

Identification of Double Bond Positions and Relative Acyl Chain Positions in Egg Yolk Phosphatidylcholines Using OAD-TOF System

Applications
| 2026 | Shimadzu
Instrumentation
LC/MS, LC/MS/MS, LC/TOF, LC/HRMS
Manufacturer
Shimadzu
Industries
Food & Agriculture

High Molecular-Weight Polysaccharide Characterization by SEC-MALS Using GTxResolve™ 1000 and 2000 Å SEC Columns

Applications
| 2026 | Waters
Instrumentation
GPC/SEC, Consumables, LC columns
Manufacturer
Waters
Industries
Pharma & Biopharma, Food & Agriculture

Development and Optimization for a Comprehensive LC/MS/MS Method for the Detection of 74 PFAS Compounds

Applications
| 2026 | Agilent Technologies
Instrumentation
LC/MS, LC/MS/MS, LC/QQQ
Manufacturer
Agilent Technologies
Industries
Food & Agriculture

PFAS in Biota: Risk Context & Robust Analytical Solutions

Others
| 2026 | ALS Europe
Instrumentation
Laboratory analysis, LC/MS, LC/MS/MS
Manufacturer
Industries
Environmental
 

Related articles

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science
Article | Scientists

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science

Two outstanding early-career researchers at UCT Prague, Filipa Oliveira and Stella Gonsales, received prestigious GAČR JUNIOR STAR grants for innovative research in materials science and sustainable chemistry.
UCT Prague
tag
share
more
Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription
Article | Science and research

Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription

Scientists at IOCB Prague reveal a previously unknown mechanism that initiates gene transcription. Using cryo-EM, they uncover how alarmone molecules enable RNA synthesis under stress.
Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
tag
share
more
Food Adulteration and How It Is Revealed by Analytical Chemistry
Article | Food

Food Adulteration and How It Is Revealed by Analytical Chemistry

Food adulteration threatens quality and consumer trust. Discover how HPLC and modern chromatographic systems from Watrex Praha help identify oil, honey, and wine adulteration with high confidence.
Watrex Praha
tag
share
more
Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria
Interview | Video

Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria

This podcast explores how chromatography (FPLC/SEC) and mass spectrometry support malaria drug discovery, from protein purification and QC to interaction studies and complex sample preparation.
Organomation
tag
share
more
 

Related content

Overcoming Strong Solvent Effects in the Analysis of Vepdegestrant

Applications
| 2026 | Agilent Technologies
Instrumentation
HPLC
Manufacturer
Agilent Technologies
Industries
Pharma & Biopharma

Identification of Double Bond Positions and Relative Acyl Chain Positions in Egg Yolk Phosphatidylcholines Using OAD-TOF System

Applications
| 2026 | Shimadzu
Instrumentation
LC/MS, LC/MS/MS, LC/TOF, LC/HRMS
Manufacturer
Shimadzu
Industries
Food & Agriculture

High Molecular-Weight Polysaccharide Characterization by SEC-MALS Using GTxResolve™ 1000 and 2000 Å SEC Columns

Applications
| 2026 | Waters
Instrumentation
GPC/SEC, Consumables, LC columns
Manufacturer
Waters
Industries
Pharma & Biopharma, Food & Agriculture

Development and Optimization for a Comprehensive LC/MS/MS Method for the Detection of 74 PFAS Compounds

Applications
| 2026 | Agilent Technologies
Instrumentation
LC/MS, LC/MS/MS, LC/QQQ
Manufacturer
Agilent Technologies
Industries
Food & Agriculture

PFAS in Biota: Risk Context & Robust Analytical Solutions

Others
| 2026 | ALS Europe
Instrumentation
Laboratory analysis, LC/MS, LC/MS/MS
Manufacturer
Industries
Environmental
 

Related articles

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science
Article | Scientists

JUNIOR STAR Grants at UCT Prague: Two talented women from abroad driving innovation in science

Two outstanding early-career researchers at UCT Prague, Filipa Oliveira and Stella Gonsales, received prestigious GAČR JUNIOR STAR grants for innovative research in materials science and sustainable chemistry.
UCT Prague
tag
share
more
Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription
Article | Science and research

Research from IOCB Prague reveals a previously unknown mechanism of genetic transcription

Scientists at IOCB Prague reveal a previously unknown mechanism that initiates gene transcription. Using cryo-EM, they uncover how alarmone molecules enable RNA synthesis under stress.
Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences
tag
share
more
Food Adulteration and How It Is Revealed by Analytical Chemistry
Article | Food

Food Adulteration and How It Is Revealed by Analytical Chemistry

Food adulteration threatens quality and consumer trust. Discover how HPLC and modern chromatographic systems from Watrex Praha help identify oil, honey, and wine adulteration with high confidence.
Watrex Praha
tag
share
more
Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria
Interview | Video

Affinity, Gel Filtration, Size Exclusion Chromatography: Repurposing Kinase Inhibitors for Malaria

This podcast explores how chromatography (FPLC/SEC) and mass spectrometry support malaria drug discovery, from protein purification and QC to interaction studies and complex sample preparation.
Organomation
tag
share
more
Other projects
GCMS
ICPMS
Follow us
More information
WebinarsAbout usContact usTerms of use
LabRulez s.r.o. All rights reserved. Content available under a CC BY-SA 4.0 Attribution-ShareAlike