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High-Resolution, Accurate-Mass Orbitrap Mass Spectrometry – Definitions, Opportunities, and Advantages

Technical notes | 2016 | Thermo Fisher ScientificInstrumentation
LC/HRMS, LC/MS, LC/MS/MS, LC/Orbitrap
Industries
Manufacturer
Thermo Fisher Scientific

Summary

Significance of Topic


High-resolution accurate-mass (HRAM) mass spectrometry has emerged as a cornerstone in analytical chemistry, enabling the precise separation and identification of analytes in complex matrices. High mass resolution (e.g., R=100,000) is critical for distinguishing isobaric interferences and revealing trace-level compounds in environmental, biological, and food samples. Accurate mass measurements support direct elemental composition assignments, transforming workflows in research, quality control, and screening.

Aims and Study Overview


The presented technical note introduces the fundamental definitions, operational principles, and analytical advantages of Orbitrap-based mass spectrometers. It reviews IUPAC recommendations for mass resolution and resolving power, demonstrates the impact of resolution on compound separation and accurate-mass screening, and compares performance across different instrument generations. Focus is placed on translating theoretical considerations into practical workflows for qualitative and quantitative analyses.

Methodology and Instrumentation


The analysis relies on Fourier transform–based Orbitrap mass analyzers, where the transient signal of ion motion is converted into m/z spectra via Fourier transformation. Key methodological parameters include:
  • Mass resolution settings inversely proportional to sqrt(m/z) and proportional to acquisition time.
  • Peak width characterization at full width half maximum (FWHM) to calculate resolution R = m/Δm.
  • Mass tolerance windows (±2–5 ppm) for extracted ion chromatograms (XICs) to balance selectivity and sensitivity.
Instrumentation portfolio includes Thermo Scientific LTQ FT MS, LTQ Orbitrap MS, Exactive series (Q Exactive HF, Q Exactive), and high-end Q-ToF systems for comparative resolution benchmarks.

Main Results and Discussion


High mass resolution was shown to resolve isobaric interferences such as pesticide isopyrine masked at R=25,000 but distinguished at R=100,000. Simulated peaks for MRFA peptide isotopologues (Δm=0.011 u) require R≈100,000 for clear separation. Elemental composition of thiabendazole at m/z 202.04336 was unambiguously determined as C10H8N3S using ±5 ppm mass accuracy and fine isotope structure. Resolution-dependent XICs of iprovalicarb (m/z 321.21713) demonstrated false negatives at low resolution, highlighting the need for adequate resolving power to avoid background noise and ensure quantitative reliability. Mass precision across chromatographic peaks maintained scan-to-scan reproducibility within ±1 ppm, yielding robust quantification.

Benefits and Practical Applications


  • Direct elemental composition determination without tandem MS, accelerating compound identification.
  • Enhanced selectivity in complex matrices, reducing false positives in screening workflows.
  • Improved quantitation through narrow mass tolerance extraction, ensuring accurate peak integration.
  • Sub-ppm mass accuracy and sub-ppb detection limits for trace-level analysis across pharmaceuticals, environmental pollutants, and metabolomics.

Future Trends and Opportunities


Continued instrument optimization aims to increase resolution while reducing acquisition time, enabling real-time HRAM screening. Integration with advanced data processing algorithms and machine learning will streamline spectral deconvolution and elemental formula generation. Emerging applications include high-throughput non-targeted screening, stable isotope labeling studies, and in situ analyses in miniaturized or portable HRAM instruments.

Conclusion


Orbitrap-based HRAM mass spectrometry delivers unparalleled resolution, accuracy, and precision, supporting confident compound identification and quantification in challenging matrices. Adherence to standardized definitions for resolution and resolving power ensures consistent reporting. The technology’s versatility and expanding instrument portfolio make it a transformative tool in analytical chemistry.

Reference


1. Murray KK, Boyd RK, Eberlin MN, Langley GJ, Li L, Naito Y. IUPAC recommendations on mass resolution and resolving power definitions. Pure Appl. Chem. 2013;85:1515–1609.
2. McLafferty FW, Tureček F. Interpretation of Mass Spectra. 4th ed. Mill Valley, CA: University Science Books; 1993.
3. Makarov A. Electrostatic axially harmonic orbital trapping: high-performance mass analysis. Anal. Chem. 2000;72(6):1156–62.
4. Makarov A, Denisov E, Kholomeev A, Balschun W, Lange O, Strupat K, Horning S. Performance evaluation of a hybrid linear ion trap/orbitrap mass spectrometer. Anal. Chem. 2006;78(7):2113–20.
5. Makarov A, Scigelova M. Coupling liquid chromatography to Orbitrap mass spectrometry. J. Chromatogr. A. 2010;1217(25):3938–45.

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